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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891048.1_cds_XP_016445748.1_40679
CDS Infomation

[gene=LOC107770936] [db_xref=GeneID:107770936] [protein=nudix hydrolase 3-like isoform X2] [protein_id=XP_016445748.1] [location=join(9367..9368,10282..10359,11283..11379,25467..25600,26019..26100,26794..26880,29225..29331,30250..30421,30569..30810,30892..30973,31900..31965,32777..32854,32941..33036,34272..34378,34501..34669,34898..34981,36056..36150,36245..36335,36413..36559,37623..37685)] [gbkey=CDS]
Sequence

ATGCGAGAGCTTCAAGAAGAACTTGGTGTAACTCTTCCGAAGGATGCATTTGAATTAATA
TTTGTTTTTCTTCAAGAGTGCACTATCAATGATGGCAAGTTCATCAACAATGAATACAAT
GATGTATATCTAGTGACAACAATAGATCCAATTCCTTTGGAGGCCTTTACACTTCAGGAA
TCAGAAGTTTCAGCTGTAAAATATCTCTCTCTTGAGGAGTACAGACAAGTGCTTGCTCAA
GAGCATCCTGACTATGTGCCTTATGATGTGAATGAGGAATATGGTCAGCTCTTTACGATA
ATTGAAAAGAGGTACAAGGAAAATGCTGAAGCTAGAAGTTTGACTCTTGACAAGCAGCTA
AACCGCTATGCTAGTACTTCCCTCTCTGCAGAGTTGACTGGGCTGACTGCAGCAGACAAA
GAAGCCTTAACTCTTCTGGTCAAAGCTGCAACAATCATGGACAAGATCTTTTATCTGCAG
GTTTGGTATAGCAATCCATCTTTGAGAGACTGGTTAAAAGAAAATGCTGACAAATCACAG
TTGGACAAATTGAAATGGATGTACTACGTAATAAACAAAAGTCCATGGTCTTGCCTGGAT
GAAAACAAGGCTTTTCTGACGACTGCAGATTCAGCTGTCAAGCTGCTTCCGAACGCAACA
AAGCCTGTACCAGGTTGGAAGGGTCTTGAATATAGAACAGCATTTCCTGCTGCGAAACCT
CCTGGTGCAAATTTCTATCCACCAGATATGGACAAAATGGAATTCAACTTATGGAAAGAT
AGTCTTCAAGAAGATAAACGGGAAGAAGCAATGGGCTTTTTCAATGTTATTAGAAGGCAT
AGTGAATCACTGTTTGAAGATACAATATCCCAAAAAACGGAAAATGTCACTAGCTCTTCT
CATGATCTGTATGTGGTTCCTTATTCTCAAGAGTACAACTCTCTTCTTGCTGAAGCAGCC
ACCTTGCTTCGTGAAGCAGGAGAAATGGCCAGCTCATCTAGTTTAAAGAGACTTCTTTCT
AGCAAGTCTGATGCCTTCCTTTCAAATGACTACTATGATTCAGATATCGCCTGGATGGAG
TTGGACTCCAAGTTAGATGTCACCATTGGCCCATATGAAACATATGAAGATTCACTTTTT
GGATACAAGGCAACATTTGAGGCATTTATAGGAGTCCGTGATGACAAAGCAACAGCTCAA
CTCAAATTGTTTGGTGATCATCTGCAGATTTTGGAGAAGAATCTGCCAATGGATAATATT
TACAAGTCAGAAAATGTTACAGCTGCTCCCATCAGGGTTATCCAGCTTCTTTACAATGCA
GGGGATGTGAAGGGCCCTCAAACAGTTGCATTTAATCTTCCAAACGATGAACGTATAGTT
AAAGATCGAGGAACGTCAATGGTCATGCTTAAGAATGTTTCAGAAGCAAAGTTCAAGCTT
ATCCTTAAGCCTATAGCTGATGTGTGTATTATGGAAGAACAACGGGATTTTGTGGACTTT
GAATCTTTCTTCACTCACACAATTTGTCATGAGTGCTGCCATGGAATTGGGCCTCACACA
ATCACACTTCCGAATGGGCAGAAGTCGACTGTCAGACTAGAGCTGCAAGAACTTCATTCA
TCACTGGAAGAAGCAAAGGCAGATATTGTTGGGCTTTGGGCTCTTAGGTTTCTAATGGAC
AAGGATTTGCTTCCGAAAAGCCTGGCCAAGTCAATGTATGTCTCTTTTCTTGCTGGATGT
TTCCGCTCGGTACGCTTTGGATTAGAGGAAGCTCATGGGAAAGGACAGGCATTGCAGTTT
AACTATTTGTTCGAGAAAGGCGCATTTATTTTGCATCCTGATGAAACATTTGCCGTTGAC
TTTGAAAAGGTTGAAGATAGTGTTGCGAGCTTGAGCAGGGAAATTCTCACAATACAAGCA
AGAGGCGACAAAGAAGCTGCTAGAACCCTTCTTCAGAAATATGGTGTGATGACACCACCA
CTGAAACGCGCACTGGAAAAGCTGGAGACTGTTCAGGTCCCGGTGGATATTATTCCTGAT
TTTCCCATTGCTAACCAAATTTTACGCTATATCAATTGA

Peptide Sequence

PEP ID

XP_016445748.1
PEP Infomation

PREDICTED: nudix hydrolase 3-like isoform X2 [Nicotiana tabacum]
Sequence

MRELQEELGVTLPKDAFELIFVFLQECTINDGKFINNEYNDVYLVTTIDPIPLEAFTLQE
SEVSAVKYLSLEEYRQVLAQEHPDYVPYDVNEEYGQLFTIIEKRYKENAEARSLTLDKQL
NRYASTSLSAELTGLTAADKEALTLLVKAATIMDKIFYLQVWYSNPSLRDWLKENADKSQ
LDKLKWMYYVINKSPWSCLDENKAFLTTADSAVKLLPNATKPVPGWKGLEYRTAFPAAKP
PGANFYPPDMDKMEFNLWKDSLQEDKREEAMGFFNVIRRHSESLFEDTISQKTENVTSSS
HDLYVVPYSQEYNSLLAEAATLLREAGEMASSSSLKRLLSSKSDAFLSNDYYDSDIAWME
LDSKLDVTIGPYETYEDSLFGYKATFEAFIGVRDDKATAQLKLFGDHLQILEKNLPMDNI
YKSENVTAAPIRVIQLLYNAGDVKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKL
ILKPIADVCIMEEQRDFVDFESFFTHTICHECCHGIGPHTITLPNGQKSTVRLELQELHS
SLEEAKADIVGLWALRFLMDKDLLPKSLAKSMYVSFLAGCFRSVRFGLEEAHGKGQALQF
NYLFEKGAFILHPDETFAVDFEKVEDSVASLSREILTIQARGDKEAARTLLQKYGVMTPP
LKRALEKLETVQVPVDIIPDFPIANQILRYIN

Transcript Sequence

Gene sequence data has not been registered.